The detailed information of tRNA gene sequence


Sequence ID>WENV170645615
Genome IDJNSL01000054
Search identical group
Phylum/Class[JNSL] freshwater metagenome; water column of the freshwater reservoir Embalse de Amadorio in Spain
Species
Start position on genome 17178
End posion on genome 17087
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ccccacactt
tRNA gene sequence 
GGAGACGTCGCATAGCCCGGTCGAGTGCGCCTCACTGCTAACGAGGTAAGGGGTTAAACC
CTTCAGGAGTTCAAATCTCCTCGTCTCCGCCG
Downstream region at tRNA end position 
cgtttatttt
Secondary structure (Cloverleaf model)
>WENV170645615	Ser	GCT
                   t      GCCG cgtttatttt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     T C C T C     A
    C C G A        C      | | | | |     A
  C         T A C G       A G G A G     C
  G         + | | |                 T T
  G         G T G C
    T C G A        G     TAAGGGGTTAAACCCTTC
                    C - G
                    C - G
                    T - A
                    C - G
                    A   C
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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