The detailed information of tRNA gene sequence


Sequence ID>WENV170646091
Genome IDJQGF01063508
Search identical group
Phylum/Class[JQGF] wastewater metagenome; domestic wastewater sediment treated with ammonia and hydroxylamine at 100mg /litre each
Species
Start position on genome 260
End posion on genome 162
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
acccgtcggc
tRNA gene sequence 
GGCAGGACGTCCCAGGCTGGTGCCGGGCCCGGTCTTCAAAACCGGTGTGTGGTGCTGAGA
GGCGCTGCAGGGGGGTTCGATTCCCCTGTCCTGCCGCCA
Downstream region at tRNA end position 
ttccccgttc
Secondary structure (Cloverleaf model)
>WENV170646091	SeC(p)	TCA
                   c      GCCA ttccccgttc
                     G - C
                     G - C
                     C - G
                     A - T
                     G - C
                     G - C
                     A - T
                     C - G          T T
                    G     T C C C C     A
      C G G        T      + | | | |     G
    T       A C C C       G G G G G     C
    G         | | |                 T T
    G       C G G G
      T G C        C     TGTGTGGTGCTGAGAGGCGCTGCAG
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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