The detailed information of tRNA gene sequence


Sequence ID>WENV170646119
Genome IDJQGF01094322
Search identical group
Phylum/Class[JQGF] wastewater metagenome; domestic wastewater sediment treated with ammonia and hydroxylamine at 100mg /litre each
Species
Start position on genome 219
End posion on genome 130
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
cagggatcac
tRNA gene sequence 
GGAGAGGTCGCATAGCTTGGTCTAGTGCGCGCGATTGGAAATCGCGTATCCTGCAAGGGA
TCGAGGGTTCAAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
gaaacgcacg
Secondary structure (Cloverleaf model)
>WENV170646119	Ser	GGA
                   c      GCCA gaaacgcacg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
    T C G A        C      | | | | |     A
  T         T A C G       G A G G G     C
  G         + | | |                 T T
  G         G T G C
    T C T A        G     TATCCTGCAAGGGATC
                    C - G
                    G - C
                    C - G
                    G - C
                    A - T
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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