The detailed information of tRNA gene sequence


Sequence ID>WENV170646244
Genome IDJQGG01077370
Search identical group
Phylum/Class[JQGG] wastewater metagenome; domestic wastewater sediment treated with nitrate and nitrite at 100mg /litre each
Species
Start position on genome 206
End posion on genome 304
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
ctatagattc
tRNA gene sequence 
GGAGGCGCATCCTGTCCGGTGATGGGCGCGGTCTTCAAAACCGTTTGCGGGTGCGCGAGA
GCGTACCTGGGTGGGTTCGACTCCCACACGCCTCCGCCA
Downstream region at tRNA end position 
gtatcagtga
Secondary structure (Cloverleaf model)
>WENV170646244	SeC(p)	TCA
                   c      GCCA gtatcagtga
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C
                     C   A          T C
                    A     C A C C C     A
      C C T        T      | | | | |     G
    G       G T C C       G T G G G     C
    G       + + | |                 T T
    T       T G G G
      G A          C     TTGCGGGTGCGCGAGAGCGTACCTGG
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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