The detailed information of tRNA gene sequence


Sequence ID>WENV170646548
Genome IDJQIA01000004
Search identical group
Phylum/Class[JQIA] marine sediment metagenome; oil-polluted sediment collected from 3 locations (0.5 km, 0.7 km and 0.9 km) around wellhead
Species
Start position on genome 26950
End posion on genome 26874
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
aaggaaatgc
tRNA gene sequence 
GCGGTTGTAGCTCAGCTGGTTAGAGTGCCGGCCTGTCACGCCGGAGGTCGCGGGTTCGAG
CCCCGTCAACCGCGCCA
Downstream region at tRNA end position 
ctttcctctt
Secondary structure (Cloverleaf model)
>WENV170646548	Asp	GTC
                   c      GCCA ctttcctctt
                     G - C
                     C - G
                     G - C
                     G - C
                     T - A
                     T - A
                     G - C          C G
                    T     T G C C C     A
      C G A        A      + | | | |     G
    T       C T C G       G C G G G     C
    G       | | | +                 T T
    G       G A G T
      T T A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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