The detailed information of tRNA gene sequence


Sequence ID>WENV170646549
Genome IDJQIA01000009
Search identical group
Phylum/Class[JQIA] marine sediment metagenome; oil-polluted sediment collected from 3 locations (0.5 km, 0.7 km and 0.9 km) around wellhead
Species
Start position on genome 95274
End posion on genome 95198
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cgcgtaaggc
tRNA gene sequence 
GGGCCTGTAGCTCAGTTGGTTAGAGCAGAGCGCTCATAACGCTTTGGTCGCAGGTTCGAG
TCCTGCCGGGCCTACCA
Downstream region at tRNA end position 
aattcataat
Secondary structure (Cloverleaf model)
>WENV170646549	Met	CAT
                   c      ACCA aattcataat
                     G + T
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     G - C          T G
                    T     C G T C C     A
      T G A        A      | | | | |     G
    T       C T C G       G C A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     TGGTC
                    G + T
                    A - T
                    G - C
                    C - G
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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