The detailed information of tRNA gene sequence


Sequence ID>WENV170646738
Genome IDJQIA01002484
Search identical group
Phylum/Class[JQIA] marine sediment metagenome; oil-polluted sediment collected from 3 locations (0.5 km, 0.7 km and 0.9 km) around wellhead
Species
Start position on genome 4324
End posion on genome 4250
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
gttgttttat
tRNA gene sequence 
GGCCCCTTCGTCTAGCGGTTAGGACGTTACCCTTTCACGGTGAAAACACGGGTTCGATTC
CCGTAGGGGTCACCA
Downstream region at tRNA end position 
tagagatttc
Secondary structure (Cloverleaf model)
>WENV170646738	Glu	TTC
                   t      ACCA tagagatttc
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     C - G
                     T - A          T T
                    T     T G C C C     A
      C G A        C      | | | | |     G
    G       T C T G       A C G G G     C
    G       + | | |                 T T
    T       G G A C
      T A          G     AAAC
                    T - A
                    T + G
                    A - T
                    C - G
                    C - G
                  C       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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