The detailed information of tRNA gene sequence


Sequence ID>WENV170646802
Genome IDJQIA01003476
Search identical group
Phylum/Class[JQIA] marine sediment metagenome; oil-polluted sediment collected from 3 locations (0.5 km, 0.7 km and 0.9 km) around wellhead
Species
Start position on genome 410
End posion on genome 484
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aagaattata
tRNA gene sequence 
GGGCCTATAGCTCAGCTGGTTAGAGTAGTTGACTCATAATCAATTGGTCCCTGGTTCGAG
TCCAGGTGGGCCCACtg
Downstream region at tRNA end position 
caaaaaagcc
Secondary structure (Cloverleaf model)
>WENV170646802	Met	CAT
                   a      ACtg caaaaaagcc
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     A - T          T G
                    T     G G A C C     A
      C G A        A      | | | | |     G
    T       C T C G       C C T G G     C
    G       | | | +                 T T
    G       G A G T
      T T A        A     TGGTC
                    G + T
                    T - A
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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