The detailed information of tRNA gene sequence


Sequence ID>WENV170646874
Genome IDJQIA01004567
Search identical group
Phylum/Class[JQIA] marine sediment metagenome; oil-polluted sediment collected from 3 locations (0.5 km, 0.7 km and 0.9 km) around wellhead
Species
Start position on genome 4619
End posion on genome 4543
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
cacccaccac
tRNA gene sequence 
GGAGCGGTAGTTCAGCTGGTTAGAATACCGGCCTGTCACGCCGGTGGTCGCGGGTTCGAA
TCCCGTCCGCTCCGCCA
Downstream region at tRNA end position 
tatactaaag
Secondary structure (Cloverleaf model)
>WENV170646874	Asp	GTC
                   c      GCCA tatactaaag
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C
                     G - C          T A
                    T     T G C C C     A
      C G A        A      + | | | |     G
    T       C T T G       G C G G G     C
    G       | | | +                 T T
    G       G A A T
      T T A        A     TGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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