The detailed information of tRNA gene sequence


Sequence ID>WENV170646913
Genome IDJQIA01005684
Search identical group
Phylum/Class[JQIA] marine sediment metagenome; oil-polluted sediment collected from 3 locations (0.5 km, 0.7 km and 0.9 km) around wellhead
Species
Start position on genome 4762
End posion on genome 4838
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aaatacaaat
tRNA gene sequence 
GGCGAGGTAGCTCAGTTGGTTAGAGCGCAGGATTCATAACCCTGAGGTCTCGGGTTCAAA
TCCCGATTTCGCTACAA
Downstream region at tRNA end position 
gttaacctta
Secondary structure (Cloverleaf model)
>WENV170646913	Met	CAT
                   t      ACAA gttaacctta
                     G + T
                     G - C
                     C - G
                     G - C
                     A - T
                     G + T
                     G + T          T A
                    T     A G C C C     A
      T G A        A      | | | | |     A
    T       C T C G       T C G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    A - T
                    G - C
                    G - C
                    A   C
                  T       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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