The detailed information of tRNA gene sequence


Sequence ID>WENV170647006
Genome IDJQIA01007740
Search identical group
Phylum/Class[JQIA] marine sediment metagenome; oil-polluted sediment collected from 3 locations (0.5 km, 0.7 km and 0.9 km) around wellhead
Species
Start position on genome 3019
End posion on genome 2932
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tcagtattct
tRNA gene sequence 
GGTGAGGTGTCCGAGTGGTTGAAGGAGCACGCCTGGAAAGCGTGTAAGTCGCAAGGCTTC
GAGGGTTCGAATCCCTCTCTCACCGCCA
Downstream region at tRNA end position 
taatatcgaa
Secondary structure (Cloverleaf model)
>WENV170647006	Ser	GGA
                   t      GCCA taatatcgaa
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C T       G A G G G     C
    G         | | |                 T T
    T       A G G A
      T G A        G     TAAGTCGCAAGGCTTC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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