The detailed information of tRNA gene sequence


Sequence ID>WENV170647082
Genome IDJQIA01009995
Search identical group
Phylum/Class[JQIA] marine sediment metagenome; oil-polluted sediment collected from 3 locations (0.5 km, 0.7 km and 0.9 km) around wellhead
Species
Start position on genome 4486
End posion on genome 4411
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
taatgaatat
tRNA gene sequence 
AGGCCAGTAGCTCAATTGGCAGAGCGACGGTCTCCAAAACCGTAGGTTGTGGGTTCGATT
CCCTCCTGGCCTGCCA
Downstream region at tRNA end position 
ttaaaatctt
Secondary structure (Cloverleaf model)
>WENV170647082	Trp	CCA
                   t      GCCA ttaaaatctt
                     A - T
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C          T T
                    T     C T C C C     A
      T A A        A      |   | | |     G
    T       C T C G       G T G G G     C
    G       | | | |                 T T
    G       G A G C
      C A          G     AGGTT
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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