The detailed information of tRNA gene sequence


Sequence ID>WENV170647106
Genome IDJQIA01011064
Search identical group
Phylum/Class[JQIA] marine sediment metagenome; oil-polluted sediment collected from 3 locations (0.5 km, 0.7 km and 0.9 km) around wellhead
Species
Start position on genome 3434
End posion on genome 3523
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
aataccttgt
tRNA gene sequence 
GGAGAGGTGCCAGAGTGGTCGAATGGGGCGGTCTCGAAAACCGTTGAGCCTTCGCGGGTT
CCCAGGGTTCGAATCCCTGTCTCTCCGCCA
Downstream region at tRNA end position 
caggcttttc
Secondary structure (Cloverleaf model)
>WENV170647106	Ser	CGA
                   t      GCCA caggcttttc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     G T C C C     A
      T G A        G      | | | | |     G
    G       G A C C       C A G G G     C
    G         | | |                 T T
    T       A T G G
      C G A        G     TGAGCCTTCGCGGGTTCC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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