The detailed information of tRNA gene sequence


Sequence ID>WENV170647301
Genome IDJQIA01019602
Search identical group
Phylum/Class[JQIA] marine sediment metagenome; oil-polluted sediment collected from 3 locations (0.5 km, 0.7 km and 0.9 km) around wellhead
Species
Start position on genome 3170
End posion on genome 3095
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
nnnncgttac
tRNA gene sequence 
AGGCCAGTGGCTCAATTGGCAGAGCAGCGGTCTCCAAAACCGCAGGTTGTGGGTTCGAGT
CCCTCCTGGCCTGCCA
Downstream region at tRNA end position 
ttagttttaa
Secondary structure (Cloverleaf model)
>WENV170647301	Trp	CCA
                   c      GCCA ttagttttaa
                     A - T
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C          T G
                    T     C T C C C     A
      T A A        G      |   | | |     G
    T       C T C G       G T G G G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     AGGTT
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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