The detailed information of tRNA gene sequence


Sequence ID>WENV170647394
Genome IDJQIA01024818
Search identical group
Phylum/Class[JQIA] marine sediment metagenome; oil-polluted sediment collected from 3 locations (0.5 km, 0.7 km and 0.9 km) around wellhead
Species
Start position on genome 2265
End posion on genome 2190
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
acgtaattta
tRNA gene sequence 
GGGGCTATAGCTCAATTGGGAGAGCGCCGCCCTTGCAAGGCGGAGGTTAGCGGTTCGATC
CCGCTTAGCTCCACAA
Downstream region at tRNA end position 
tacatctctt
Secondary structure (Cloverleaf model)
>WENV170647394	Ala	TGC
                   a      ACAA tacatctctt
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     T - A
                     A - T          C T
                    T     T C G C C     A
      T A A        A      | | | | |     G
    T       C T C G       A G C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTT
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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