The detailed information of tRNA gene sequence


Sequence ID>WENV170647477
Genome IDJQIA01030244
Search identical group
Phylum/Class[JQIA] marine sediment metagenome; oil-polluted sediment collected from 3 locations (0.5 km, 0.7 km and 0.9 km) around wellhead
Species
Start position on genome 1851
End posion on genome 1775
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
aatcgttgtg
tRNA gene sequence 
CGGAGTGTAGCGCAGCCTGGTAGCGCATCTGGTTTGGGACCAGAGGGTCGGGGGTTCGAG
TCCCTCCACTCCGACCA
Downstream region at tRNA end position 
tcgacgatag
Secondary structure (Cloverleaf model)
>WENV170647477	Pro	TGG
                   g      ACCA tcgacgatag
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C          T G
                    T     C T C C C     A
      C G A        A      | + | | |     G
    C       C G C G       G G G G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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