The detailed information of tRNA gene sequence


Sequence ID>WENV170647571
Genome IDJQIA01037094
Search identical group
Phylum/Class[JQIA] marine sediment metagenome; oil-polluted sediment collected from 3 locations (0.5 km, 0.7 km and 0.9 km) around wellhead
Species
Start position on genome 1607
End posion on genome 1682
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
tttgtgttta
tRNA gene sequence 
AGGCCAGTAGCTCAATTGGCAGAGCGACGGTCTCCAAAACCGTAGGTTGGGGGTTCGATG
CCCTCCTGGCCTGCCA
Downstream region at tRNA end position 
tttaagggta
Secondary structure (Cloverleaf model)
>WENV170647571	Trp	CCA
                   a      GCCA tttaagggta
                     A - T
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C          G T
                    T     C T C C C     A
      T A A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      C A          G     AGGTT
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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