The detailed information of tRNA gene sequence


Sequence ID>WENV170647630
Genome IDJREQ01000606
Search identical group
Phylum/Class[JREQ] marine sediment metagenome; clay from marine sediments 31 meters below sea floor depth collected from drilling site U1352C
Species
Start position on genome 203
End posion on genome 297
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
aaataacatt
tRNA gene sequence 
GGAGGTGTAACTGTCCTGGTGGGCAGCGCGGTCTTCAAAACCGTAGTGGGGAGTATGGCT
TCCCGGGTAGGTTCGATTCCTATCCACCTCCGCCA
Downstream region at tRNA end position 
agttttaaag
Secondary structure (Cloverleaf model)
>WENV170647630	SeC(p)	TCA
                   t      GCCA agttttaaag
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     T - A
                     G - C
                     T   C          T T
                    A     T A T C C     A
      T C C        A      + | | | |     G
    G       T G T C       G T A G G     C
    G       + | | |                 T T
    T       G C A G
      G G          C     AGTGGGGAGTATGGCTTCCCGG
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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