The detailed information of tRNA gene sequence


Sequence ID>WENV170647658
Genome IDJREQ01001353
Search identical group
Phylum/Class[JREQ] marine sediment metagenome; clay from marine sediments 31 meters below sea floor depth collected from drilling site U1352C
Species
Start position on genome 4885
End posion on genome 4972
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
agttacctct
tRNA gene sequence 
GCGGGGTTGCCCTAGCCTGGTAGGGGGCAGGCCTGCTAAGCCTGTGGTCCTTCGGGCCGC
GCGGGTTCAAATCCCGCACCCCGCGCCA
Downstream region at tRNA end position 
ctcaaatgaa
Secondary structure (Cloverleaf model)
>WENV170647658	Ser	GCT
                   t      GCCA ctcaaatgaa
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A          T A
                    T     C G C C C     A
      C G A        G      | | | | |     A
    C       T C C C       G C G G G     C
    T       + | | |                 T T
    G       G G G G
      G T A        G     TGGTCCTTCGGGCCGC
                    C - G
                    A - T
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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