The detailed information of tRNA gene sequence


Sequence ID>WENV170647668
Genome IDJREQ01001778
Search identical group
Phylum/Class[JREQ] marine sediment metagenome; clay from marine sediments 31 meters below sea floor depth collected from drilling site U1352C
Species
Start position on genome 493
End posion on genome 416
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
ccattgacaa
tRNA gene sequence 
GCCCTGGTAGTATAGTCCGGTCTAGTATAGGCGGCTGTCGCCCGCCCGACCCGGGTTCAA
ATCCCGGCCAGGGCGCCA
Downstream region at tRNA end position 
ttttccagaa
Secondary structure (Cloverleaf model)
>WENV170647668	Asp	GTC
                   a      GCCA ttttccagaa
                     G - C
                     C - G
                     C - G
                     C - G
                     T - A
                     G - C
                     G - C          T A
                    T     G G C C C     A
    C T G A        A      | | | | |     A
  C         T A T G       C C G G G     C
  G         + | | +                 T T
  G         G T A T
    T C T A        A     CGAC
                    G - C
                    G - C
                    C - G
                    G - C
                    G - C
                  C       C
                  T       G
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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