The detailed information of tRNA gene sequence


Sequence ID>WENV170647697
Genome IDJREQ01002581
Search identical group
Phylum/Class[JREQ] marine sediment metagenome; clay from marine sediments 31 meters below sea floor depth collected from drilling site U1352C
Species
Start position on genome 10679
End posion on genome 10602
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
nnnaatgcat
tRNA gene sequence 
GGGGCTGTCGGCTAGCTTGGTCTAGGCTTGGAGACTTGGGCTCTCTAGACCCCGGTTCAA
ATCCGGGCAGCCCCACCA
Downstream region at tRNA end position 
aatttcagca
Secondary structure (Cloverleaf model)
>WENV170647697	Pro	TGG
                   t      ACCA aatttcagca
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     G - C          T A
                    T     G G G C C     A
    T C G A        C      | | | | |     A
  T         T C G G       C C C G G     C
  G         + | | +                 T T
  G         G G C T
    T C T A        T     AGAC
                    G + T
                    G - C
                    A - T
                    G - C
                    A - T
                  C       C
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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