The detailed information of tRNA gene sequence


Sequence ID>WENV170647780
Genome IDJREQ01004520
Search identical group
Phylum/Class[JREQ] marine sediment metagenome; clay from marine sediments 31 meters below sea floor depth collected from drilling site U1352C
Species
Start position on genome 315
End posion on genome 403
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ttattatttt
tRNA gene sequence 
GGAGAGATGGCTGAGTGGTAAAGCGGCGGTCTCGAAAACCGTTGAGGGTTAATAACCCTT
CGTGGGTTCGAATCCCACTCTCTCCGCCA
Downstream region at tRNA end position 
atcaaaaaaa
Secondary structure (Cloverleaf model)
>WENV170647780	Ser	CGA
                   t      GCCA atcaaaaaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C A C C C     A
        G A        G      | | | | |     G
      T     G T C G       G T G G G     C
      G       | | |                 T T
      G     A A G C
        T A        G     TGAGGGTTAATAACCCTTC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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