The detailed information of tRNA gene sequence


Sequence ID>WENV170647797
Genome IDJREQ01005116
Search identical group
Phylum/Class[JREQ] marine sediment metagenome; clay from marine sediments 31 meters below sea floor depth collected from drilling site U1352C
Species
Start position on genome 1281
End posion on genome 1357
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
tcaggtctgt
tRNA gene sequence 
GGGGTCGTCGTCTAGTTTGGTCAAGGATACCAGCCTGGGGCGCTGGCGATCCGGGGTTCA
AATCCCCGCGACCCCACtg
Downstream region at tRNA end position 
aactttcttt
Secondary structure (Cloverleaf model)
>WENV170647797	Pro	GGG
                   t      ACtg aactttcttt
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     C - G
                     G - C          T A
                    T     G C C C C     A
    T T G A        C      | | | | |     A
  T         T C T G       C G G G G     C
  G         + | | +                 T T
  G         G G A T
    T C A A        A     CGATC
                    C - G
                    C - G
                    A - T
                    G - C
                    C - G
                  C       C
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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