The detailed information of tRNA gene sequence


Sequence ID>WENV170647829
Genome IDJRER01000030
Search identical group
Phylum/Class[JRER] marine sediment metagenome; clay from marine sediments 136 meters below sea floor depth collected from drilling site U1352C
Species
Start position on genome 7239
End posion on genome 7315
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
ccccagccat
tRNA gene sequence 
GGCGCATTCGTCTAGTGGCCTAGGACACCTCCCTCTCAAGGAGGAGATCACCGGTTCGAA
TCCGGTATGCGCTACCA
Downstream region at tRNA end position 
attggattta
Secondary structure (Cloverleaf model)
>WENV170647829	Glu	CTC
                   t      ACCA attggattta
                     G + T
                     G - C
                     C - G
                     G - C
                     C - G
                     A - T
                     T - A          T A
                    T     T G G C C     A
      T G A        C      | | | | |     G
    G       T C T G       A C C G G     C
    G       + | | |                 T T
    C       G G A C
      C T A        A     AGATC
                    C - G
                    C - G
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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