The detailed information of tRNA gene sequence


Sequence ID>WENV170647837
Genome IDJRER01000171
Search identical group
Phylum/Class[JRER] marine sediment metagenome; clay from marine sediments 136 meters below sea floor depth collected from drilling site U1352C
Species
Start position on genome 2974
End posion on genome 3065
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tcaagtccgt
tRNA gene sequence 
GGAGGGATCGCATAGTGGTCTAGTGCGGGCGCCTGCTAAGCGCTTACCCCGAGAAATCGG
GGTCGTGGGTTCAAATCCCACTCCCTCCGCCA
Downstream region at tRNA end position 
gtcagaaaat
Secondary structure (Cloverleaf model)
>WENV170647837	Ser	GCT
                   t      GCCA gtcagaaaat
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C A C C C     A
      T G A        C      | | | | |     A
    G       T A C G       G T G G G     C
    G       + | | |                 T T
    T       G T G C
      C T A        G     TACCCCGAGAAATCGGGGTC
                    G + T
                    G - C
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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