The detailed information of tRNA gene sequence


Sequence ID>WENV170647839
Genome IDJRER01000195
Search identical group
Phylum/Class[JRER] marine sediment metagenome; clay from marine sediments 136 meters below sea floor depth collected from drilling site U1352C
Species
Start position on genome 8087
End posion on genome 8010
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
tttgagagtt
tRNA gene sequence 
GGGCGGGTAGATCAGCTTGGAATGATCGCGGCGTTGGCATCGCCGAGGTCGCGGGTTCAA
ATCCCGCCCCGTCCACTA
Downstream region at tRNA end position 
ttaacaaata
Secondary structure (Cloverleaf model)
>WENV170647839	Ala	GGC
                   t      ACTA ttaacaaata
                     G - C
                     G - C
                     G + T
                     C - G
                     G - C
                     G - C
                     G - C          T A
                    T     C G C C C     A
    T C G A        A      | | | | |     A
  T         C T A G       G C G G G     C
  G         | | | |                 T T
  G         G A T C
    A A T          G     AGGTC
                    C - G
                    G - C
                    G - C
                    C - G
                    G - C
                  T       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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