The detailed information of tRNA gene sequence


Sequence ID>WENV170647870
Genome IDJRER01000657
Search identical group
Phylum/Class[JRER] marine sediment metagenome; clay from marine sediments 136 meters below sea floor depth collected from drilling site U1352C
Species
Start position on genome 512
End posion on genome 604
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
attcaattca
tRNA gene sequence 
GGAGAGGTGGCTGAGTGGTCTAAAGCGGTTGATTCGAAATCAATTGAGTGCCTCAAAGGT
GCTCCGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
gttgtcaaaa
Secondary structure (Cloverleaf model)
>WENV170647870	Ser	CGA
                   a      GCCA gttgtcaaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G T C G       G T G G G     C
    G         | | |                 T T
    T       A A G C
      C T A        G     TGAGTGCCTCAAAGGTGCTCC
                    G + T
                    T - A
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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