The detailed information of tRNA gene sequence


Sequence ID>WENV170647893
Genome IDJRER01000971
Search identical group
Phylum/Class[JRER] marine sediment metagenome; clay from marine sediments 136 meters below sea floor depth collected from drilling site U1352C
Species
Start position on genome 2594
End posion on genome 2520
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ttatcggcat
tRNA gene sequence 
AGGAGTGTAGCTCAGTTTGGAAGAGCAGCGGTCTCCAAAACCGCAGGTCGGGGGTTCGAG
TCCTCCCACTCCTGCtt
Downstream region at tRNA end position 
tgttttcccc
Secondary structure (Cloverleaf model)
>WENV170647893	Trp	CCA
                   t      GCtt tgttttcccc
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C          T G
                    T     C C T C C     A
      T G A        A      | | + | |     G
    T       C T C G       G G G G G     C
    T       | | | |                 T T
    G       G A G C
      G A A        A     AGGTC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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