The detailed information of tRNA gene sequence


Sequence ID>WENV170647898
Genome IDJRER01001065
Search identical group
Phylum/Class[JRER] marine sediment metagenome; clay from marine sediments 136 meters below sea floor depth collected from drilling site U1352C
Species
Start position on genome 145
End posion on genome 221
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tgtttgaaaa
tRNA gene sequence 
CGCGGGGTAGAGCAGTCTGGTAGCTCGTCGGGCTCATAACCCGGAGGTCCTTGGTTCAAA
TCCAAGCCCCGCTACCA
Downstream region at tRNA end position 
ctatttataa
Secondary structure (Cloverleaf model)
>WENV170647898	Met	CAT
                   a      ACCA ctatttataa
                     C   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     G A A C C     A
      T G A        A      | | | | |     A
    C       C G A G       C T T G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T + G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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