The detailed information of tRNA gene sequence


Sequence ID>WENV170647909
Genome IDJRER01001243
Search identical group
Phylum/Class[JRER] marine sediment metagenome; clay from marine sediments 136 meters below sea floor depth collected from drilling site U1352C
Species
Start position on genome 12121
End posion on genome 12210
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
tcatgaaaag
tRNA gene sequence 
GGGCCCGTGGCGCAGCCTGGATAGCGCGTCGGCCTTCTAAGCGAGACGAGGTAAGCCGAA
GATCCGGGGTTCAAATCCCCGCGGGCCCGCtt
Downstream region at tRNA end position 
gttccacaag
Secondary structure (Cloverleaf model)
>WENV170647909	Arg	TCT
                   g      GCtt gttccacaag
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     G C C C C     A
    C C G A        G      | | | | |     A
  T         C G C G       C G G G G     C
  G         | | | |                 T T
  G         G C G C
    A T A          G     ACGAGGTAAGCCGAAGATC
                    T + G
                    C   A
                    G   G
                    G - C
                    C - G
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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