The detailed information of tRNA gene sequence


Sequence ID>WENV170648024
Genome IDJRER01002741
Search identical group
Phylum/Class[JRER] marine sediment metagenome; clay from marine sediments 136 meters below sea floor depth collected from drilling site U1352C
Species
Start position on genome 5178
End posion on genome 5269
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
cgtctgctat
tRNA gene sequence 
GGAGGGATCGCATAGTGGCCTAGTGCGGGCGCCTGCTAAGCGCTTACCCTGGTAATTCGG
GGTCGTGGGTTCGAATCCCACTCCCTCCGCCA
Downstream region at tRNA end position 
cggaagatta
Secondary structure (Cloverleaf model)
>WENV170648024	Ser	GCT
                   t      GCCA cggaagatta
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C A C C C     A
      T G A        C      | | | | |     G
    G       T A C G       G T G G G     C
    G       + | | |                 T T
    C       G T G C
      C T A        G     TACCCTGGTAATTCGGGGTC
                    G + T
                    G - C
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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