The detailed information of tRNA gene sequence


Sequence ID>WENV170648070
Genome IDJRER01003762
Search identical group
Phylum/Class[JRER] marine sediment metagenome; clay from marine sediments 136 meters below sea floor depth collected from drilling site U1352C
Species
Start position on genome 306
End posion on genome 218
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ttattatttt
tRNA gene sequence 
GGAGAGATGGCTGAGTGGTAAAGCGGCGGTCTCGAAAACCGTTGAGGGTTAATAACCCTT
CGTGGGTTCGAATCCCACTCTCTCCGCCA
Downstream region at tRNA end position 
atcaaaaaaa
Secondary structure (Cloverleaf model)
>WENV170648070	Ser	CGA
                   t      GCCA atcaaaaaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C A C C C     A
        G A        G      | | | | |     G
      T     G T C G       G T G G G     C
      G       | | |                 T T
      G     A A G C
        T A        G     TGAGGGTTAATAACCCTTC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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