The detailed information of tRNA gene sequence


Sequence ID>WENV170648075
Genome IDJRER01003957
Search identical group
Phylum/Class[JRER] marine sediment metagenome; clay from marine sediments 136 meters below sea floor depth collected from drilling site U1352C
Species
Start position on genome 2975
End posion on genome 2899
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tgcctgaaac
tRNA gene sequence 
TGCGGGGTAGAGCAGTCTGGTAGCTCGTCGGGCTCATAACCCGGAGGTCGTTGGTTCAAA
TCCAACCCCCGCTACCA
Downstream region at tRNA end position 
ctttctttcc
Secondary structure (Cloverleaf model)
>WENV170648075	Met	CAT
                   c      ACCA ctttctttcc
                     T   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A A C C     A
      T G A        A      | | | | |     A
    C       C G A G       G T T G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T + G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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