The detailed information of tRNA gene sequence


Sequence ID>WENV170648104
Genome IDJRER01004804
Search identical group
Phylum/Class[JRER] marine sediment metagenome; clay from marine sediments 136 meters below sea floor depth collected from drilling site U1352C
Species
Start position on genome 3614
End posion on genome 3541
Amino Acid Thr
Anticodon CGT
Upstream region at tRNA start position 
nnataggtgt
tRNA gene sequence 
GCCTCGGTGGCTCAGCCCGGTAGAGCGGCAGCCTCGTAAGCTGTTGGCCGCGGGTTCAAA
TCCCGCCCGAGGCTttt
Downstream region at tRNA end position 
cgtcttgctt
Secondary structure (Cloverleaf model)
>WENV170648104	Thr	CGT
                   t      Tttt cgtcttgctt
                     G - C
                     C - G
                     C - G
                     T - A
                     C - G
                     G - C
                     G - C          T A
                    T     C G C C C     A
      C G A        G      | | | | |     A
    C       C T C G       G C G G G     C
    C       | | | |                 T T
    G       G A G C
      G T A        G     TGGCC
                    G + T
                    C - G
                    A - T
                    G - C
                    C - G
                  C       A
                  T       A
                    C G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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