The detailed information of tRNA gene sequence


Sequence ID>WENV170648145
Genome IDJRER01006039
Search identical group
Phylum/Class[JRER] marine sediment metagenome; clay from marine sediments 136 meters below sea floor depth collected from drilling site U1352C
Species
Start position on genome 5570
End posion on genome 5661
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
caaaattgcg
tRNA gene sequence 
GGAGAGGTGACTGAGTGGTTGAAAGTGCACGATTGGAAATCGTGTAGGGGGTTAAAGCCT
CCTCGAGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
aaacccaacc
Secondary structure (Cloverleaf model)
>WENV170648145	Ser	GGA
                   g      GCCA aaacccaacc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T C A       G A G G G     C
    G         | | |                 T T
    T       A A G T
      T G A        G     TAGGGGGTTAAAGCCTCCTC
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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