The detailed information of tRNA gene sequence


Sequence ID>WENV170648388
Genome IDJRHI01000270
Search identical group
Phylum/Class[JRHI] sediment metagenome; sediment from deep within a dark volcanic ice cave with no known source of introduced
Species
Start position on genome 53388
End posion on genome 53299
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gtcgcatcac
tRNA gene sequence 
GGAGAGGTGGATGAGCGGTTGAAGTCGCACGCCTGGAAAGCGTGTTTAGGTTAATTCCTA
ACGCGGGTTCGAATCCCGCCCTCTCCGCCA
Downstream region at tRNA end position 
gtatatctat
Secondary structure (Cloverleaf model)
>WENV170648388	Ser	GGA
                   c      GCCA gtatatctat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G C C C     A
      C G A        G      | | | | |     G
    G       G T A G       G C G G G     C
    G         + | |                 T T
    T       A G T C
      T G A        G     TTTAGGTTAATTCCTAAC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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