The detailed information of tRNA gene sequence


Sequence ID>WENV170648439
Genome IDJRHI01000399
Search identical group
Phylum/Class[JRHI] sediment metagenome; sediment from deep within a dark volcanic ice cave with no known source of introduced
Species
Start position on genome 44353
End posion on genome 44260
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tgtccagacc
tRNA gene sequence 
GGAGACGTGGCCGAGTGGCTGAAGGCGGCGGTTTGCTAAACCGTTATACGCTTGTAAAGG
CGTATCGAGGGTTCGAATCCCTCCGTCTCCGCCA
Downstream region at tRNA end position 
atccagattt
Secondary structure (Cloverleaf model)
>WENV170648439	Ser	GCT
                   c      GCCA atccagattt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        G     TATACGCTTGTAAAGGCGTATC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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