The detailed information of tRNA gene sequence


Sequence ID>WENV170648565
Genome IDJRHI01000814
Search identical group
Phylum/Class[JRHI] sediment metagenome; sediment from deep within a dark volcanic ice cave with no known source of introduced
Species
Start position on genome 10856
End posion on genome 10763
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
ctcgtgcctt
tRNA gene sequence 
GGGAGAAGTCTGGGGCTGGTGCCTCAGCCGGTCTTCAAAACCGCGTTGGTCTCCGCAAGG
GGACTGGTAGGTTCGATTCCTATCTTCTCCCGCCc
Downstream region at tRNA end position 
taacttttag
Secondary structure (Cloverleaf model)
>WENV170648565	SeC(p)	TCA
                   t      GCCc taacttttag
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     G - C          T T
                    T     T A T C C     A
      T C G        C      + | | | |     G
    G       G G G T       G T A G G     C
    G       | + | |                 T T
    T       C T C A
      G C          G     GTTGGTCTCCGCAAGGGGACTG
                    C   C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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