The detailed information of tRNA gene sequence


Sequence ID>WENV170648655
Genome IDJRHI01001275
Search identical group
Phylum/Class[JRHI] sediment metagenome; sediment from deep within a dark volcanic ice cave with no known source of introduced
Species
Start position on genome 418
End posion on genome 325
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
acaaccgcac
tRNA gene sequence 
cGGAGGTGAACGGGGTCTGGTGGCCCCCCTCGTCTTCAAAACGAGTGGGACGGGTGATCC
CNGTCCGGTGGGTTCGATTCCTGCCACCTCCGCGAc
Downstream region at tRNA end position 
cgcggcgacg
Secondary structure (Cloverleaf model)
>WENV170648655	SeC	TCA
                   c      CGAc cgcggcgacg
                     c - G
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     T - A
                     G - C          T T
                    A     C G T C C     A
      C T G        A      | + + | |     G
    T       G G G C       G T G G G     C
    G       | | |                   T T
    G       C C C C
      T G G        C     TGGGACGGGTGATCCCNGTCCG
                    C - G
                    T - A
                    C - G
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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