The detailed information of tRNA gene sequence


Sequence ID>WENV170648783
Genome IDJRHI01002230
Search identical group
Phylum/Class[JRHI] sediment metagenome; sediment from deep within a dark volcanic ice cave with no known source of introduced
Species
Start position on genome 11845
End posion on genome 11746
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
gtttgggccc
tRNA gene sequence 
TGGGGATGTTCGGGGGCTGGTGCCTTCCGCGGTCTTCAAAACCGTTGTGAGGTCCTGATG
AGGGGTCTCAGGTGGGTTCGATTCCCATCCATCCCCGCCAc
Downstream region at tRNA end position 
ctcctgaact
Secondary structure (Cloverleaf model)
>WENV170648783	SeC(p)	TCA
                   c      CCAc ctcctgaact
                     T + G
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A          C C
                    G     C C T A C     T
    C G G G        T      | | + |       T
  T         G G C T       G G G T T     A
  G         | +                     C G
  G         C T T C
    T G C          C     TGTGAGGTCCTGATGAGGGGTCTCAGGT
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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