The detailed information of tRNA gene sequence


Sequence ID>WENV170649109
Genome IDJRHI01006444
Search identical group
Phylum/Class[JRHI] sediment metagenome; sediment from deep within a dark volcanic ice cave with no known source of introduced
Species
Start position on genome 4623
End posion on genome 4533
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
cgcgcgcgcc
tRNA gene sequence 
GGAGAGATGGATGAGCGGCTTAAGTCGCACGCCTGGAAAGCGTGTGTAGGTTCATAGCCT
ACCGCGGGTTCGAATCCCGCTCTCTCCGCCA
Downstream region at tRNA end position 
aatcgtctaa
Secondary structure (Cloverleaf model)
>WENV170649109	Ser	GGA
                   c      GCCA aatcgtctaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C G C C C     A
      C G A        G      | | | | |     G
    G       G T A G       G C G G G     C
    G         + | |                 T T
    C       A G T C
      T T A        G     TGTAGGTTCATAGCCTACC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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