The detailed information of tRNA gene sequence


Sequence ID>WENV170649321
Genome IDJRYC01000655
Search identical group
Phylum/Class[JRYC] activated sludge metagenome; activated biomass of a common effluent treatment plant treating industrial wastewater
Species
Start position on genome 11280
End posion on genome 11191
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
cgaacaggac
tRNA gene sequence 
GGAAGGGTGGCCGAGTGGTTTAAGGCAGCGGTCTTGAAAACCGCCGTGGGTTCACGCTCA
CCGTGGGTTCGAATCCCACCCCTTCCGCCA
Downstream region at tRNA end position 
cctcattgcc
Secondary structure (Cloverleaf model)
>WENV170649321	Ser	TGA
                   c      GCCA cctcattgcc
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    T       A G G C
      T T A        A     CGTGGGTTCACGCTCACC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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