The detailed information of tRNA gene sequence


Sequence ID>WENV170649348
Genome IDJRYC01001858
Search identical group
Phylum/Class[JRYC] activated sludge metagenome; activated biomass of a common effluent treatment plant treating industrial wastewater
Species
Start position on genome 3520
End posion on genome 3609
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
cacggcttcc
tRNA gene sequence 
GGAGAGGTGGCAGAGTGGTCGATCGCGCCGCACTCGAAATGCGGAGTACGGGCAACCGTA
CCGTGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
taacttattg
Secondary structure (Cloverleaf model)
>WENV170649348	Ser	CGA
                   c      GCCA taacttattg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      |   | | |     G
    G       G A C G       G T G G G     C
    G       +   | |                 T T
    T       T C G C
      C G A        G     AGTACGGGCAACCGTACC
                    C - G
                    C - G
                    G - C
                    C - G
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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