The detailed information of tRNA gene sequence


Sequence ID>WENV170649351
Genome IDJRYC01002155
Search identical group
Phylum/Class[JRYC] activated sludge metagenome; activated biomass of a common effluent treatment plant treating industrial wastewater
Species
Start position on genome 2982
End posion on genome 3073
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
cctgccccgc
tRNA gene sequence 
GGAGAGGTGCCGGAGTGGTCGATCGGGGCGGTCTCGAAAACCGTTGTACCGCGCGAGCGG
TACCGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
tcgaccttag
Secondary structure (Cloverleaf model)
>WENV170649351	Ser	CGA
                   c      GCCA tcgaccttag
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G G C C       G T G G G     C
    G       + | | |                 T T
    T       T C G G
      C G A        G     TGTACCGCGCGAGCGGTACC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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