The detailed information of tRNA gene sequence


Sequence ID>WENV170649355
Genome IDJRYC01002252
Search identical group
Phylum/Class[JRYC] activated sludge metagenome; activated biomass of a common effluent treatment plant treating industrial wastewater
Species
Start position on genome 1616
End posion on genome 1709
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ttttatttat
tRNA gene sequence 
GGAGAGGTCGCATAGTGGCCTAGTGCGGCGGTTTGCTAAACCGCTGTACGGTTGTAAAGC
CGTACCGAGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
cccccacact
Secondary structure (Cloverleaf model)
>WENV170649355	Ser	GCT
                   t      GCCA cccccacact
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        C      | | | | |     G
    G       T A C G       G A G G G     C
    G       + | | |                 T T
    C       G T G C
      C T A        G     TGTACGGTTGTAAAGCCGTACC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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