The detailed information of tRNA gene sequence


Sequence ID>WENV170649358
Genome IDJRYC01002320
Search identical group
Phylum/Class[JRYC] activated sludge metagenome; activated biomass of a common effluent treatment plant treating industrial wastewater
Species
Start position on genome 3189
End posion on genome 3285
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
gtcgacggaT
tRNA gene sequence 
GGAGGAGAATCGTCCCCGGTGGGGCGTCCGGACTTCAAATCCGGGTGGGGCCGCGAGCCG
GTCCCGGGTGGGTTCGACTCCCACTCTCTTCCGCC
Downstream region at tRNA end position 
Acccggtgcc
Secondary structure (Cloverleaf model)
>WENV170649358	SeC(p)	TCA
                   T      CGCC Acccggtgcc
                     G - C
                     G + T
                     A - T
                     G - C
                     G + T
                     A   C
                     G + T          T C
                    A     C A C C C     A
      C C C        A      | | | | |     G
    C       T G C T       G T G G G     C
    G       +     +                 T T
    G       G G C G
      T G G        T     GTGGGGCCGCGAGCCGGTCCCGG
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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