The detailed information of tRNA gene sequence


Sequence ID>WENV170649360
Genome IDJRYC01002466
Search identical group
Phylum/Class[JRYC] activated sludge metagenome; activated biomass of a common effluent treatment plant treating industrial wastewater
Species
Start position on genome 279
End posion on genome 354
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cccgtcgtcg
tRNA gene sequence 
GGGCCTGTAGCTCAGTGGTTAGAGCTGGCCGCTCATAACGGTCTGGTCGCAGGTTCGAAT
CCTGCCGGGCCCACCA
Downstream region at tRNA end position 
cgcaccccgc
Secondary structure (Cloverleaf model)
>WENV170649360	Met	CAT
                   g      ACCA cgcaccccgc
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     G - C          T A
                    T     C G T C C     A
      T G A        A      | | | | |     G
    G       C T C G       G C A G G     C
    G       | | | |                 T T
    T       G A G C
      T A          T     TGGTC
                    G - C
                    G + T
                    C - G
                    C - G
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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