The detailed information of tRNA gene sequence


Sequence ID>WENV170649376
Genome IDJRYC01003394
Search identical group
Phylum/Class[JRYC] activated sludge metagenome; activated biomass of a common effluent treatment plant treating industrial wastewater
Species
Start position on genome 6342
End posion on genome 6418
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
cgcgtctcgc
tRNA gene sequence 
GGGGGTGTAGCTCAGTTGGTTAGAGCGCCGGCCTGTCACGCCGGAGGTCGCGGGTTCGAG
TCCCGTCACTCTCGCCA
Downstream region at tRNA end position 
ctcctgcccg
Secondary structure (Cloverleaf model)
>WENV170649376	Asp	GTC
                   c      GCCA ctcctgcccg
                     G - C
                     G + T
                     G - C
                     G + T
                     G - C
                     T - A
                     G - C          T G
                    T     T G C C C     A
      T G A        A      + | | | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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