The detailed information of tRNA gene sequence


Sequence ID>WENV170649388
Genome IDJRYC01004304
Search identical group
Phylum/Class[JRYC] activated sludge metagenome; activated biomass of a common effluent treatment plant treating industrial wastewater
Species
Start position on genome 2751
End posion on genome 2840
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gactgattct
tRNA gene sequence 
GGAGAGGTCGCATAGTCTGGCCTAGTGCGCACGATTGGAAATCGTGTATCTCGCAAGGGA
TCGCGGGTTCGAATCCCGCCCTCTCCGCCA
Downstream region at tRNA end position 
attagataac
Secondary structure (Cloverleaf model)
>WENV170649388	Ser	GGA
                   t      GCCA attagataac
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G C C C     A
    C T G A        C      | | | | |     G
  T         T A C G       G C G G G     C
  G         + | | |                 T T
  G         G T G C
    C C T A        G     TATCTCGCAAGGGATC
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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