The detailed information of tRNA gene sequence


Sequence ID>WENV170649389
Genome IDJRYC01004380
Search identical group
Phylum/Class[JRYC] activated sludge metagenome; activated biomass of a common effluent treatment plant treating industrial wastewater
Species
Start position on genome 756
End posion on genome 666
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
cccgcctcgc
tRNA gene sequence 
GGAGGGGTGGCCGAGCGGTCGAAGGCGCACGCCTGGAAAGTGTGTAGGGGTCCAAAGCCC
CTCGCGGGTTCGAATCCCGCTCCCTCCGCCA
Downstream region at tRNA end position 
gttttccaaa
Secondary structure (Cloverleaf model)
>WENV170649389	Ser	GGA
                   c      GCCA gttttccaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G + T          T A
                    T     C G C C C     A
      C G A        G      | | | | |     G
    G       G C C G       G C G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TAGGGGTCCAAAGCCCCTC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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